SV_array: SVs (20,955) selected for DNA capture array TGG1.0: TGG1.0 in vg format (index provided) TGG1.1: TGG1.1 in vg format (index provided) TGG1.1-VCF: VCF files used for constructing TGG1.1 cds: cds sequences for all assemblies genome: Genome sequences for all assemblies gff: Genome annotations for all assemblies pep: Protein sequences for all assemblies repeat: Repeat annotation for all assemblies genotypes: VCF files for 706 tomato accessions